BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012A01SP1|AL426295
(728 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1524 1349 0.0
>3x_Contig1524
Length = 11623
Score = 1349 bits (666), Expect = 0.0
Identities = 702/728 (96%)
Strand = Plus / Plus
Query: 1 aagatataccagagtattttgcmatggattacatcaaacatatacacagagatttgacgg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 777 aagatataccagagtattttgcaatggattacatcaaacatatacacagagatttgacgg 836
Query: 61 cattggaatttcgtctaawacatttccttatgamagttatcttaccgcaagagatggatt 120
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 837 cattggaatttcgtctaaaacatttccttatgaaagttatcttaccgcaagagatggatt 896
Query: 121 ttactcagaacatcaaccatgtatccaacctttctaaatcagttacacaactccacatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 ttactcagaacatcaaccatgtatccaacctttctaaatcagttacacaactccacatgg 956
Query: 181 acattgaaaaawttaaacatgataccaaagatatatatttggraaarttggcagccgcgt 240
||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 957 acattgaaaaaattaaacatgataccaaagatatatatttggaaaaattggcagccgcgt 1016
Query: 241 tcaacgggtctgattcagaatctttcgtcagtyaacttaccacactaatggactcgcatg 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1017 tcaacgggtctgattcagaatctttcgtcagtaaacttaccacactaatggactcgcatg 1076
Query: 301 tttctcgattacaggcactagaagggaaaactgttgatttccagaacgaattggragcta 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1077 tttctcgattacaggcactagaagggaaaactgttgatttccagaacgaattggaagcta 1136
Query: 361 aaaagctgcmacttcgtaagttagagaatctgatcmagttaaatgacatgatcggcgact 420
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1137 aaaagctgcaacttcgtaagttagagaatctgatcaagttaaatgacatgatcggcgact 1196
Query: 421 tcaaaaggracatgadattwtctgabaagttgaragaatattatggtacatttggtgatg 480
|||||||| |||||| ||| ||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 1197 tcaaaaggaacatgaaattatctgaaaagttgaaagaatattatggtacatttggtgatg 1256
Query: 481 tgactgtgttagccctatcgatatcgttaatnatgtrtttbtttkggcgctggttcgcct 540
||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||
Sbjct: 1257 tgactgtgttagccctatcgatatcgttaataatgtatttatttaggcgctggttcgcct 1316
Query: 541 cagaataagacgaagtggatganaccgtcttaagtttggcattcacacacaacagtaggt 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1317 cagaataagacgaagtggatgaaaccgtcttaagtttggcattcacacacaacagtaggt 1376
Query: 601 cgaagacaagtwattwatatgtwtttwtwtwggaaccaattatgtttcgtcttcctttct 660
||||||||||| ||| |||||| ||| | | |||||||||||||||||||||||||||||
Sbjct: 1377 cgaagacaagtaattaatatgtatttatataggaaccaattatgtttcgtcttcctttct 1436
Query: 661 caattctctggggcatgggatatacggtgaagcaatgctttgaatcaacatatacatccg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 caattctctggggcatgggatatacggtgaagcaatgctttgaatcaacatatacatccg 1496
Query: 721 aataaccc 728
||||||||
Sbjct: 1497 aataaccc 1504
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3579
Number of Sequences: 1807
Number of extensions: 3579
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 728
length of database: 10,358,551
effective HSP length: 16
effective length of query: 712
effective length of database: 10,329,639
effective search space: 7354702968
effective search space used: 7354702968
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)